STRINGSTRING
Slit_1324 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1324" - Diheme Cytochrome C in Sideroxydans lithotrophicus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1324Diheme Cytochrome C (187 aa)    
Predicted Functional Partners:
Slit_1323
Hypothetical protein (134 aa)
 
          0.976
Slit_1321
Cytochrome B561 (214 aa)
          0.954
Slit_1015
Hypothetical protein (140 aa)
 
          0.861
Slit_1322
Hypothetical protein (208 aa)
              0.806
Slit_1325
Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (294 aa)
              0.612
Slit_2247
Hypothetical protein (74 aa)
   
          0.524
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
           
  0.512
Slit_1320
Major facilitator superfamily MFS_1 (401 aa)
              0.460
Slit_1319
Hypothetical protein (163 aa)
              0.460
Slit_1318
Hypothetical protein (131 aa)
              0.436
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (12%) [HD]