STRINGSTRING
Slit_1369 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1369" - Hypothetical protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1369Hypothetical protein (123 aa)    
Predicted Functional Partners:
Slit_1368
Glycosyl transferase family 39 (549 aa)
 
        0.957
Slit_1370
Glutamine--scyllo-inositol transaminase (373 aa)
 
          0.909
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (583 aa)
     
      0.836
Slit_1373
Formyl transferase domain protein (307 aa)
 
        0.799
Slit_1374
NAD-dependent epimerase/dehydratase (347 aa)
 
        0.790
Slit_1375
Polysaccharide deacetylase (301 aa)
 
        0.784
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (459 aa)
   
        0.716
Slit_1646
Phosphatidate cytidylyltransferase (274 aa)
     
      0.663
Slit_1372
Glycosyl transferase family 2 (338 aa)
 
        0.640
Slit_2615
O-antigen polymerase (597 aa)
   
          0.636
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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