STRINGSTRING
Slit_1378 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1378" - Hypothetical protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1378Hypothetical protein (129 aa)    
Predicted Functional Partners:
Slit_1381
Major facilitator superfamily MFS_1 (424 aa)
              0.634
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (341 aa)
              0.634
Slit_1379
Appr-1-p processing domain protein (170 aa)
              0.634
Slit_1377
Nucleotide sugar dehydrogenase (388 aa)
              0.623
Slit_1382
Hypothetical protein (217 aa)
              0.604
Slit_2007
Nucleic acid binding, OB-fold, tRNA/helicase-type (255 aa)
   
          0.600
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (640 aa)
              0.544
Slit_1001
Hypothetical protein (82 aa)
 
          0.449
Slit_2616
Hypothetical protein (69 aa)
 
          0.415
Slit_1818
Multicopper oxidase type 2 (515 aa)
              0.414
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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