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Slit_1390 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1390" - Biopolymer transport protein ExbD/TolR in Sideroxydans lithotrophicus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_1390Biopolymer transport protein ExbD/TolR (136 aa)    
Predicted Functional Partners:
Slit_1389
MotA/TolQ/ExbB proton channel (218 aa)
 
 
  0.993
Slit_1388
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (220 aa)
 
 
  0.975
Slit_0517
Protein TolQ (225 aa)
 
 
  0.914
Slit_1366
MotA/TolQ/ExbB proton channel (201 aa)
   
 
  0.807
Slit_0507
TonB family protein (290 aa)
   
 
  0.803
Slit_1384
TonB-dependent receptor (711 aa)
   
   
  0.784
Slit_1386
4Fe-4S ferredoxin iron-sulfur binding domain protein (351 aa)
 
          0.748
Slit_0521
Peptidoglycan-associated lipoprotein (175 aa)
 
 
  0.713
Slit_1387
Cytochrome C biogenesis protein, transmembrane region (219 aa)
              0.710
Slit_1385
Hypothetical protein (303 aa)
              0.710
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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