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Slit_1407 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1407" - TRAP dicarboxylate transporter, DctP subunit in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Slit_1407TRAP dicarboxylate transporter, DctP subunit (348 aa)    
Predicted Functional Partners:
Slit_1409
TRAP dicarboxylate transporter, DctM subunit (431 aa)
   
  0.985
Slit_1408
Tripartite ATP-independent periplasmic transporter DctQ component (171 aa)
 
   
  0.958
Slit_0815
TRAP dicarboxylate transporter, DctM subunit (428 aa)
   
  0.904
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (445 aa)
         
  0.650
accA
acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA (322 aa)
              0.648
Slit_0816
Tripartite ATP-independent periplasmic transporter DctQ component (171 aa)
 
          0.539
Slit_2833
DNA polymerase I (929 aa)
           
  0.515
Slit_1404
Cyclic nucleotide-regulated small mechanosensitive ion channel (512 aa)
              0.480
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (423 aa)
              0.479
Slit_1413
Hypothetical protein (344 aa)
              0.479
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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