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Slit_1408 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1408" - Tripartite ATP-independent periplasmic transporter DctQ component in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Slit_1408Tripartite ATP-independent periplasmic transporter DctQ component (171 aa)    
Predicted Functional Partners:
Slit_1409
TRAP dicarboxylate transporter, DctM subunit (431 aa)
   
  0.985
Slit_1407
TRAP dicarboxylate transporter, DctP subunit (348 aa)
 
   
  0.958
Slit_0815
TRAP dicarboxylate transporter, DctM subunit (428 aa)
   
  0.876
Slit_0817
Extracellular solute-binding protein, family 7 (335 aa)
 
   
  0.808
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (141 aa)
              0.589
Slit_1412
Type IV pilus biogenesis/stability protein PilW (254 aa)
              0.587
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (359 aa)
              0.587
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (423 aa)
              0.586
Slit_1413
Hypothetical protein (344 aa)
              0.586
hisS
histidyl-tRNA synthetase (423 aa)
              0.581
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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