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dapE protein (Sideroxydans lithotrophicus) - STRING interaction network
"dapE" - Succinyl-diaminopimelate desuccinylase in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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dapESuccinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (376 aa)    
Predicted Functional Partners:
Slit_1443
Succinyldiaminopimelate transaminase (397 aa)
 
 
  0.986
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (276 aa)
       
  0.948
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (273 aa)
 
   
  0.932
Slit_1440
Arsenate reductase-like protein (115 aa)
 
        0.895
Slit_1441
Twitching motility protein (389 aa)
              0.875
prmB
protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue (301 aa)
              0.796
argA
Amino-acid N-acetyltransferase (443 aa)
   
   
  0.771
Slit_0113
3-dehydroquinate synthase (546 aa)
     
 
  0.754
Slit_1437
Squalene synthase HpnC (271 aa)
              0.714
Slit_1436
Squalene synthase HpnD (277 aa)
              0.712
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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