STRINGSTRING
Slit_1441 protein (Sideroxydans lithotrophicus) - STRING interaction network
"Slit_1441" - Twitching motility protein in Sideroxydans lithotrophicus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Slit_1441Twitching motility protein (389 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (376 aa)
              0.875
Slit_1440
Arsenate reductase-like protein (115 aa)
              0.861
Slit_2699
Type II secretion system F domain protein (405 aa)
   
   
  0.813
Slit_0684
Type II secretion system F domain protein (400 aa)
   
   
  0.811
Slit_2607
Type II secretion system F domain protein (413 aa)
   
   
  0.809
Slit_2700
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (286 aa)
   
   
  0.809
Slit_0497
General secretion pathway protein F (407 aa)
   
   
  0.800
Slit_1831
Type II secretion system F domain protein (396 aa)
   
   
  0.795
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (273 aa)
              0.792
Slit_1443
Succinyldiaminopimelate transaminase (397 aa)
              0.788
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus, S. lithotrophicus ES-1, Siderooxidans, Siderooxidans lithoautotrophicus, Sideroxydans, Sideroxydans lithotrophicus, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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