Slit_1548 protein (Sideroxydans lithotrophicus)

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Slit_1548

Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold. (786 aa)

Predicted Functional Partners:

rpoA

0.831

rpoB

0.826

rpoZ

0.783

Slit_1547

0.543

Slit_0098

0.493

Slit_0686

0.493

Slit_0809

0.493

Slit_1740

0.493

Slit_1937

0.481

Slit_1549

0.419

Your Current Organism:

Sideroxydans lithotrophicus

NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Slit_0098	Slit_1548	Slit_0098	Slit_1548	KEGG: tgr:Tgr7_2259 hypothetical protein.	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	0.493
Slit_0098	rpoA	Slit_0098	Slit_0793	KEGG: tgr:Tgr7_2259 hypothetical protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.580
Slit_0098	rpoB	Slit_0098	Slit_0760	KEGG: tgr:Tgr7_2259 hypothetical protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.525
Slit_0098	rpoZ	Slit_0098	Slit_0399	KEGG: tgr:Tgr7_2259 hypothetical protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.453
Slit_0686	Slit_1548	Slit_0686	Slit_1548	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein.	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	0.493
Slit_0686	rpoA	Slit_0686	Slit_0793	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.580
Slit_0686	rpoB	Slit_0686	Slit_0760	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.526
Slit_0686	rpoZ	Slit_0686	Slit_0399	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.453
Slit_0809	Slit_1548	Slit_0809	Slit_1548	KEGG: avn:Avin_01660 hypothetical protein.	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	0.493
Slit_0809	rpoA	Slit_0809	Slit_0793	KEGG: avn:Avin_01660 hypothetical protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.580
Slit_0809	rpoB	Slit_0809	Slit_0760	KEGG: avn:Avin_01660 hypothetical protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.525
Slit_0809	rpoZ	Slit_0809	Slit_0399	KEGG: avn:Avin_01660 hypothetical protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.453
Slit_1547	Slit_1548	Slit_1547	Slit_1548	KEGG: aci:ACIAD3077 hypothetical protein.	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	0.543
Slit_1548	Slit_0098	Slit_1548	Slit_0098	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	KEGG: tgr:Tgr7_2259 hypothetical protein.	0.493
Slit_1548	Slit_0686	Slit_1548	Slit_0686	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: app:CAP2UW1_0625 tetratricopeptide TPR_2 repeat protein.	0.493
Slit_1548	Slit_0809	Slit_1548	Slit_0809	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	KEGG: avn:Avin_01660 hypothetical protein.	0.493
Slit_1548	Slit_1547	Slit_1548	Slit_1547	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	KEGG: aci:ACIAD3077 hypothetical protein.	0.543
Slit_1548	Slit_1549	Slit_1548	Slit_1549	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	KEGG: bxe:Bxe_A2534 putative HTH-type transcriptional regulator,YgjM-like; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.	0.419
Slit_1548	Slit_1740	Slit_1548	Slit_1740	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	SMART: Tetratricopeptide repeat; KEGG: glo:Glov_1853 tetratricopeptide TPR_2 repeat protein.	0.493
Slit_1548	Slit_1937	Slit_1548	Slit_1937	Tex-like protein protein-like protein; KEGG: har:HEAR3018 putative polyribonucleotide nucleotidyltransferase; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold.	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mei:Msip34_1664 DNA methylase N-4/N-6 domain protein.	0.481

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