Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Slit_1750KEGG: nmu:Nmul_A1972 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (218 aa)    
Predicted Functional Partners:
Slit_1748
PFAM: protein of unknown function DUF214; KEGG: nmu:Nmul_A0948 hypothetical protein.
 
 
 
 0.973
Slit_1751
Arylesterase; KEGG: mfa:Mfla_1250 arylesterase; PFAM: lipolytic protein G-D-S-L family.
 
 
   0.932
Slit_2077
PFAM: protein of unknown function DUF214; KEGG: pin:Ping_3708 ABC transporter permease protein.
     0.929
Slit_2078
PFAM: protein of unknown function DUF214; KEGG: app:CAP2UW1_4287 protein of unknown function DUF214.
     0.923
Slit_1490
PFAM: protein of unknown function DUF214; KEGG: mei:Msip34_1219 protein of unknown function DUF214.
     0.921
pstB
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
    
0.909
Slit_0155
KEGG: abo:ABO_0851 nitrate transport ATP-binding protein.
 
      0.852
Slit_2169
PFAM: lipolytic protein G-D-S-L family; KEGG: nmc:NMC1592 putative lipase.
 
 
   0.832
Slit_0898
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.797
Slit_1749
KEGG: pna:Pnap_4960 hypothetical protein.
       0.773
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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