Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slit_2073KEGG: dar:Daro_1151 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase. (592 aa)    
Predicted Functional Partners:
Slit_1830
PFAM: type II secretion system protein E; KEGG: tbd:Tbd_1295 type II secretion system protein.
  
  
 
0.919
Slit_0498
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
  
 
0.910
Slit_0497
KEGG: cvi:CV_3812 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
 
   0.872
Slit_0684
PFAM: Type II secretion system F domain; KEGG: dar:Daro_3408 type II secretion system protein.
 
   0.872
Slit_2607
PFAM: Type II secretion system F domain; KEGG: har:HEAR1952 type IV pilus assembly protein TapC.
 
   0.872
Slit_2699
PFAM: Type II secretion system F domain; KEGG: mei:Msip34_0586 type II secretion system protein.
 
   0.870
Slit_1831
PFAM: Type II secretion system F domain; KEGG: tbd:Tbd_1294 type II secretion system protein F.
 
   0.869
Slit_2700
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.742
Slit_2074
PFAM: Aldose 1-epimerase; KEGG: tbd:Tbd_2730 dihydroxyacid dehydratase; Belongs to the glucose-6-phosphate 1-epimerase family.
       0.658
Slit_0491
PFAM: General secretion pathway L; KEGG: nmu:Nmul_A1893 general secretion pathway L.
  
 
 0.606
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.