Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slit_2080KEGG: neu:NE0828 HlyD family secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (393 aa)    
Predicted Functional Partners:
Slit_2078
PFAM: protein of unknown function DUF214; KEGG: app:CAP2UW1_4287 protein of unknown function DUF214.
 
  
 0.965
Slit_2077
PFAM: protein of unknown function DUF214; KEGG: pin:Ping_3708 ABC transporter permease protein.
 
  
 0.921
Slit_2079
KEGG: nmu:Nmul_A0951 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.919
Slit_1490
PFAM: protein of unknown function DUF214; KEGG: mei:Msip34_1219 protein of unknown function DUF214.
 
  
 0.810
Slit_1973
KEGG: dar:Daro_2803 outer membrane efflux protein.
  
 0.736
Slit_0935
KEGG: tbd:Tbd_2697 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
  
 0.735
Slit_1487
Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
  
 0.735
Slit_1597
KEGG: pol:Bpro_1022 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
  
 0.735
Slit_2913
KEGG: tbd:Tbd_2697 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
  
 0.735
Slit_0933
KEGG: dar:Daro_0458 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.701
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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