Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Slit_0022 | Slit_1015 | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | 0.494 |
Slit_0022 | Slit_1323 | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | 0.484 |
Slit_0022 | Slit_2568 | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | 0.405 |
Slit_1015 | Slit_0022 | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | 0.494 |
Slit_1015 | Slit_2426 | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | 0.422 |
Slit_1015 | Slit_2568 | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | 0.780 |
Slit_1323 | Slit_0022 | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | 0.484 |
Slit_1323 | Slit_2426 | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | 0.422 |
Slit_1323 | Slit_2568 | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | 0.780 |
Slit_2426 | Slit_1015 | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | 0.422 |
Slit_2426 | Slit_1323 | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | 0.422 |
Slit_2426 | Slit_2568 | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | 0.415 |
Slit_2568 | Slit_0022 | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | KEGG: tbd:Tbd_2638 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family. | 0.405 |
Slit_2568 | Slit_1015 | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | PFAM: Domain of unknown function DUF1924; KEGG: rfr:Rfer_0746 cytochrome c-like protein. | 0.780 |
Slit_2568 | Slit_1323 | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | PFAM: Domain of unknown function DUF1924; KEGG: bph:Bphy_6332 hypothetical protein. | 0.780 |
Slit_2568 | Slit_2426 | PFAM: Dihaem cytochrome c; KEGG: dar:Daro_2813 hypothetical protein. | KEGG: azo:azo3798 putative hydrogenase expression/formation protein HupK. | 0.415 |