STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_2648Hypothetical protein; KEGG: tgr:Tgr7_0929 major facilitator transporter. (148 aa)    
Predicted Functional Partners:
Slit_2649
KEGG: cpi:Cpin_2124 hypothetical protein.
       0.790
Slit_2650
Hypothetical protein; KEGG: ter:Tery_0554 membrane bound O-acyl transferase, MBOAT.
       0.782
Slit_2647
Non-specific serine/threonine protein kinase; KEGG: tcu:Tcur_0052 protein of unknown function DUF323; PFAM: protein of unknown function DUF323.
       0.778
Slit_2646
Hypothetical protein; Manually curated; KEGG: cms:CMS_0462 potassium-transporting ATPase subunit A.
       0.749
Slit_2651
KEGG: oih:OB0951 hypothetical protein.
       0.717
Slit_2645
Hypothetical protein; Manually curated; KEGG: pjd:Pjdr2_2679 ABC transporter related.
       0.680
Slit_2644
Spermidine synthase-like protein; KEGG: bbt:BBta_1296 putative spermine/spermidine synthase family protein.
       0.459
Slit_2642
Hypothetical protein; KEGG: sgl:SG0955 lysine transporter.
       0.411
Slit_2643
Polyferredoxin-like protein; KEGG: gbm:Gbem_1233 4Fe-4S ferredoxin, iron-sulfur binding protein.
       0.411
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.