Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slit_2649KEGG: cpi:Cpin_2124 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Slit_2648
Hypothetical protein; KEGG: tgr:Tgr7_0929 major facilitator transporter.
     
 0.791
Slit_2650
Hypothetical protein; KEGG: ter:Tery_0554 membrane bound O-acyl transferase, MBOAT.
  
  
 0.791
Slit_2647
Non-specific serine/threonine protein kinase; KEGG: tcu:Tcur_0052 protein of unknown function DUF323; PFAM: protein of unknown function DUF323.
     
 0.781
Slit_2646
Hypothetical protein; Manually curated; KEGG: cms:CMS_0462 potassium-transporting ATPase subunit A.
       0.748
Slit_2651
KEGG: oih:OB0951 hypothetical protein.
     
 0.726
Slit_2645
Hypothetical protein; Manually curated; KEGG: pjd:Pjdr2_2679 ABC transporter related.
     
 0.686
Slit_0130
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.618
Slit_1608
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; KEGG: dar:Daro_0979 NADH dehydrogenase.
   
   0.599
Slit_1123
PFAM: cytochrome c oxidase subunit III; KEGG: tbd:Tbd_0560 putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein.
  
 
 0.580
Slit_0131
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.564
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.