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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slit_2872PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: tmz:Tmz1t_3262 membrane bound O-acyl transferase MBOAT family protein; Belongs to the membrane-bound acyltransferase family. (495 aa)    
Predicted Functional Partners:
Slit_0355
KEGG: rfr:Rfer_3978 acyl carrier protein.
 
 
 0.812
Slit_0354
KEGG: azo:azo0262 hypothetical protein.
  
 
 0.785
Slit_0448
PFAM: phosphopantetheine-binding; KEGG: pnu:Pnuc_0954 phosphopantetheine-binding.
  
 
 0.785
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.785
Slit_2873
KEGG: vap:Vapar_4225 hypothetical protein.
  
    0.784
Slit_2903
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: tgr:Tgr7_2079 mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase.
  
  
 0.624
apaH
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
       0.539
Slit_2883
PFAM: acyltransferase 3; KEGG: dol:Dole_1300 acyltransferase 3.
 
   
 0.474
Slit_1207
Manually curated; PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain-containing protein; SMART: Sel1 domain protein repeat-containing protein.
  
 
 0.424
Your Current Organism:
Sideroxydans lithotrophicus
NCBI taxonomy Id: 580332
Other names: S. lithotrophicus ES-1, Sideroxydans lithotrophicus ES-1, Sideroxydans lithotrophicus str. ES-1, Sideroxydans lithotrophicus strain ES-1, iron-oxidizing lithotroph ES-1
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