Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene co-occurrence
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Tlie_0010D-aminoacylase domain protein; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680: IPR012855; KEGG: nth:Nther_1852 D-aminoacylase domain protein; PFAM: D-aminoacylase domain protein; amidohydrolase; SPTR: D-aminoacylase; manually curated. (441 aa)    
Predicted Functional Partners:
Tlie_0011
Amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168: IPR002933: IPR011650: IPR017144; KEGG: aco:Amico_1612 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase, M20/M25/M40 family; TIGRFAM: amidohydrolase; Belongs to the peptidase M20A family.
 
     0.871
Tlie_0335
PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: aco:Amico_1758 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3.
 
     0.715
Tlie_1589
Peptidase M20; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933; KEGG: tai:Taci_0160 amidohydrolase; PFAM: peptidase M20; SPTR: Amidohydrolase; Belongs to the peptidase M20A family.
 
     0.597
Tlie_0009
Transposase mutator type; Required for the transposition of the insertion element.
       0.542
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
    0.501
Tlie_1691
PFAM: Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; KEGG: aco:Amico_0203 peptidase M20; SPTR: Peptidase M20.
 
    0.458
Tlie_1692
PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: aco:Amico_1758 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3.
 
     0.430
Tlie_1735
PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: aco:Amico_0203 peptidase M20; PFAM: peptidase dimerisation domain protein; peptidase M20; SPTR: Peptidase M20.
 
    0.421
Tlie_1736
PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: aco:Amico_0196 peptidase dimerization domain protein; PFAM: peptidase dimerisation domain protein; peptidase M20; SPTR: Peptidase M20.
 
    0.403
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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