STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_0192Microcompartments protein; PFAM: BMC domain; COGs: COG4810 Ethanolamine utilization protein; InterPro IPR000249: IPR009307; KEGG: tai:Taci_0087 microcompartments protein; PFAM: microcompartments protein; SPTR: Ethanolamine utilization protein EutS. (111 aa)    
Predicted Functional Partners:
Tlie_0193
Miro domain protein; PFAM: Ethanolamine utilisation - propanediol utilisation; TIGRFAM: ethanolamine utilization protein, EutP; COGs: COG4917 Ethanolamine utilization protein; InterPro IPR013684: IPR012381; KEGG: tai:Taci_0086 ethanolamine utilization protein-like protein; PFAM: Miro domain protein; SPTR: Ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
  
 0.965
Tlie_0194
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: tex:Teth514_1955 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein.
 
  
 0.890
Tlie_0204
PFAM: Cell division protein FtsA; TIGRFAM: ethanolamine utilization protein EutJ family protein; COGs: COG4820 Ethanolamine utilization protein possible chaperonin; InterPro IPR013366: IPR018484; KEGG: tjr:TherJR_0626 ethanolamine utilization protein EutJ family protein; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Ethanolamine utilization protein EutJ; TIGRFAM: ethanolamine utilization protein EutJ family protein.
 
   
 0.856
Tlie_0207
PFAM: Ethanolamine utilisation protein EutN/carboxysome; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: cbe:Cbei_4055 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Carbon dioxide concentrating mechanism protein CcmL.
 
   
 0.809
Tlie_0211
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249: IPR011238; KEGG: ckr:CKR_0770 hypothetical protein; PFAM: microcompartments protein; SPTR: Bacterial microcompartments protein.
 
  
 0.791
Tlie_0195
Microcompartments protein; PFAM: BMC domain; COGs: COG4816 Ethanolamine utilization protein; InterPro IPR000249: IPR009193; KEGG: tex:Teth514_1954 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein.
 
   
 0.762
Tlie_0201
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: tex:Teth514_1948 microcompartments protein; PFAM: microcompartments protein; SPTR: BMC domain protein.
 
  
 0.744
Tlie_0202
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: tjr:TherJR_0624 microcompartments protein; PFAM: microcompartments protein; SPTR: Ribonuclease III.
 
  
 0.729
Tlie_0208
ATP/cobalamin adenosyltransferase; PFAM: Domain of unknown function (DUF336); Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858: IPR002779: IPR005624; KEGG: tjr:TherJR_0629 ATP/cobalamin adenosyltransferase; PFAM: protein of unknown function DUF336; cobalamin adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase.
 
   
 0.705
Tlie_0203
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
   
 0.689
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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