STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_0907PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0991 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family. (638 aa)    
Predicted Functional Partners:
Tlie_0908
H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0990 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit.
 
 0.999
atpA
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.996
atpB
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.994
Tlie_0910
PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0988 H+-ATPase subunit C-like protein; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit.
  
 0.993
Tlie_0909
Hypothetical protein; PFAM: ATP synthase (E/31 kDa) subunit; KEGG: aco:Amico_0989 hypothetical protein; SPTR: H+transporting two-sector ATPase E subunit.
  
 0.992
Tlie_0962
H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0803 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit.
 
 0.991
Tlie_0964
PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0805 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit.
 
 0.989
atpA-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.988
atpA-3
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.988
Tlie_0914
PFAM: ATP synthase subunit D; COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: aco:Amico_0984 H+transporting two-sector ATPase D subunit; PFAM: H+transporting two-sector ATPase D subunit; SPTR: H+transporting two-sector ATPase D subunit; TIGRFAM: V-type ATPase, D subunit.
 
 0.987
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.