STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_0960Hypothetical protein; PFAM: Vacuolar (H+)-ATPase G subunit; KEGG: aco:Amico_0801 hypothetical protein; SPTR: Putative uncharacterized protein. (108 aa)    
Predicted Functional Partners:
Tlie_0961
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0802 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
  
 
 0.974
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.944
Tlie_0964
PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0805 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit.
   
 
 0.942
Tlie_1498
KEGG: tai:Taci_0523 ATP synthase F0, B subunit; SPTR: Putative H(+)-transporting two-sector ATPase subunit H.a.
     
  0.900
Tlie_0907
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0991 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
  
 
 0.870
Tlie_0910
PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0988 H+-ATPase subunit C-like protein; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit.
   
 
 0.870
Tlie_1496
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: tai:Taci_0521 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: Putative V-type sodium ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
  
 
 0.870
Tlie_1497
PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: tai:Taci_0522 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: ATP synthase subunit.
   
 
 0.870
Tlie_0909
Hypothetical protein; PFAM: ATP synthase (E/31 kDa) subunit; KEGG: aco:Amico_0989 hypothetical protein; SPTR: H+transporting two-sector ATPase E subunit.
  
 
 0.863
Tlie_1493
H+transporting two-sector ATPase E subunit; PFAM: ATP synthase (E/31 kDa) subunit; InterPro IPR000533: IPR002842; KEGG: tai:Taci_0518 hypothetical protein; PFAM: H+transporting two-sector ATPase E subunit; SPTR: Putative uncharacterized protein.
  
 
 0.863
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.