STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_0964PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0805 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit. (337 aa)    
Predicted Functional Partners:
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.998
Tlie_0962
H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0803 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit.
 
 0.997
Tlie_0961
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0802 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.996
Tlie_0965
PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: aco:Amico_0806 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: Vacuolar H+transporting two-sector ATPase F subunit.
 
 0.996
atpB-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.996
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.996
atpA-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.994
Tlie_0907
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0991 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.989
Tlie_0908
H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0990 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit.
 
 0.974
atpB
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.972
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.