STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_1265InterPro IPR019140; KEGG: nhl:Nhal_4031 hypothetical protein; PFAM: Protein of unknown function DUF2044, membrane; SPTR: Putative uncharacterized protein; manually curated. (1273 aa)    
Predicted Functional Partners:
Tlie_0822
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR014362: IPR006095: IPR006097: IPR006096; KEGG: mvn:Mevan_1556 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Glutamate dehydrogenase (NADP(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.891
Tlie_1266
PFAM: Type III restriction enzyme, res subunit; COGs: COG3587 Restriction endonuclease; InterPro IPR006935; KEGG: cte:CT0911 type III restriction system endonuclease; PFAM: type III restriction protein res subunit; PRIAM: Type III site-specific deoxyribonuclease; SPTR: Type III restriction system endonuclease.
 
     0.508
Tlie_1269
PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR001650: IPR014021: IPR014001; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: DNA-dependent ATPase, SNF2 family protein.
  
 0.506
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.449
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 0.449
Tlie_1267
Site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase; COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002295: IPR002052: IPR002941; KEGG: bpt:Bpet4236 type III restriction system methylase; PFAM: DNA methylase N-4/N-6 domain protein; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Type III restriction system methylase.
       0.427
Tlie_1268
KEGG: dac:Daci_4206 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.427
Tlie_1270
KEGG: tai:Taci_1497 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.427
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.