STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_1376Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (202 aa)    
Predicted Functional Partners:
Tlie_0959
PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280: IPR001566: IPR002792: IPR003402; KEGG: aco:Amico_0800 RNA methyltransferase, TrmA family; PFAM: protein of unknown function Met10; deoxyribonuclease/rho motif-related TRAM; SPTR: RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
     0.901
Tlie_1370
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: tai:Taci_0488 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
   
 0.848
Tlie_1374
PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR019896; KEGG: aco:Amico_1462 polysaccharide pyruvyl transferase CsaB; SPTR: Polysaccharide pyruvyl transferase CsaB; TIGRFAM: polysaccharide pyruvyl transferase CsaB.
 
     0.847
Tlie_1371
PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR017871: IPR003439: IPR003593; KEGG: tai:Taci_0487 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein.
     
 0.844
Tlie_1161
Hypothetical protein; COGs: COG1896 hydrolase of HD superfamily; KEGG: eel:EUBELI_00454 putative hydrolases of HD superfamily; SPTR: Putative uncharacterized protein.
 
      0.838
Tlie_1372
Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: aco:Amico_1460 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase, C-subunit.
       0.824
Tlie_1375
KEGG: aco:Amico_1463 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.824
uppP
Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.824
Tlie_1369
PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: tai:Taci_0489 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23.
 
     0.820
Tlie_1377
KEGG: aco:Amico_1465 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.808
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.