STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlie_1700PFAM: Uncharacterised protein family (UPF0259); KEGG: sfu:Sfum_4020 hypothetical protein; SPTR: Putative uncharacterized protein. (207 aa)    
Predicted Functional Partners:
buk
PFAM: Acetokinase family; TIGRFAM: butyrate kinase; COGs: COG3426 Butyrate kinase; InterPro IPR011245: IPR000890; KEGG: aco:Amico_1839 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Butyrate kinase; TIGRFAM: butyrate kinase; Belongs to the acetokinase family.
       0.773
Tlie_1702
PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR014079: IPR002505: IPR012147; KEGG: tai:Taci_0453 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; SPTR: Phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase.
       0.580
Tlie_1703
PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase; COGs: COG0280 Phosphotransacetylase; InterPro IPR002505: IPR012147; KEGG: aco:Amico_1841 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate butyryltransferase; SPTR: Phosphate butyryltransferase.
       0.425
buk-2
PFAM: Acetokinase family; TIGRFAM: butyrate kinase; COGs: COG3426 Butyrate kinase; InterPro IPR011245: IPR000890; KEGG: aco:Amico_1842 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Butyrate kinase; TIGRFAM: butyrate kinase; Belongs to the acetokinase family.
       0.425
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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