Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALO36174.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
ALO36175.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
ALO36176.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.978
ALO35762.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.873
ALO36128.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.855
ALO36311.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.851
ALO35767.1
Outer membrane channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.848
ALO35999.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.835
ALO35941.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
ALO36425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.802
ALO36424.1
Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.788
Your Current Organism:
Colwellia sp. MT41
NCBI taxonomy Id: 58049
Other names: C. sp. MT41
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