STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM66273.1COG3487 Uncharacterized iron-regulated protein. (425 aa)    
Predicted Functional Partners:
EDM66272.1
COG3488 Predicted thiol oxidoreductase.
 
    0.987
EDM69349.1
iron(III) ABC transporter, periplasmic iron(III)-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
    0.926
EDM67188.1
Hypothetical protein; COG5266 ABC-type Co2+ transport system, periplasmic component.
   
    0.852
EDM68473.1
Hypothetical nitrate reductase large subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
 0.738
EDM64859.1
COG2906 Bacterioferritin-associated ferredoxin.
  
  
 0.737
EDM67189.1
COG3656 Predicted periplasmic protein.
   
    0.693
EDM66274.1
Hypothetical protein; COG3000 Sterol desaturase.
 
     0.670
EDM68968.1
COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
    0.541
EDM66851.1
ABC transporter, periplasmic substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
    0.533
EDM69243.1
Putative periplasmic solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
    0.440
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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