Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM65939.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
EDM65936.1
Hypothetical protein.
   
   0.924
EDM65937.1
Hypothetical protein.
       0.670
EDM65938.1
Hypothetical protein.
       0.665
EDM66267.1
COG2801 Transposase and inactivated derivatives.
   
   0.621
EDM66661.1
Transposon Tn7 transposition protein tnsB; COG2801 Transposase and inactivated derivatives.
   
   0.621
EDM65298.1
COG2801 Transposase and inactivated derivatives.
   
   0.621
EDM64994.1
Probable transposase protein; COG2801 Transposase and inactivated derivatives.
   
   0.621
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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