STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM64989.1COG2902 NAD-specific glutamate dehydrogenase. (558 aa)    
Predicted Functional Partners:
EDM64821.1
Hypothetical protein; COG2902 NAD-specific glutamate dehydrogenase.
 
     0.976
EDM66475.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
     
 0.929
gcvP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.900
EDM69231.1
Putative proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.893
EDM68767.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
  
  0.885
EDM66669.1
Hypothetical protein; COG3321 Polyketide synthase modules and related proteins.
     
 0.864
EDM66614.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.797
EDM65774.1
COG0174 Glutamine synthetase.
     
 0.788
argH
COG0165 Argininosuccinate lyase; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
   
 
  0.788
EDM68322.1
Glutamate-ammonia ligase; COG0174 Glutamine synthetase.
     
 0.788
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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