STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM67335.1Hypothetical protein. (574 aa)    
Predicted Functional Partners:
EDM67334.1
Hypothetical protein.
 
     0.946
EDM67337.1
Peptidase, M19 family; COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
 
     0.873
EDM67340.1
Transcriptional regulator, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.719
EDM67336.1
COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.695
EDM67338.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
     0.614
EDM67661.1
Putative ABC transporter, permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.577
EDM68816.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.452
EDM67345.1
Putative tricarboxylic transport TctB.
  
     0.443
EDM65463.1
COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.415
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.