STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM67848.1COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (154 aa)    
Predicted Functional Partners:
EDM66974.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.817
EDM66475.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
   
 
 0.752
EDM69068.1
COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.750
EDM66490.1
Chorismate mutase/prephenate dehydratase; COG1605 Chorismate mutase.
    
  0.748
EDM68767.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
    
  0.733
EDM68062.1
L-lysine 6-monooxygenase; COG3486 Lysine/ornithine N-monooxygenase.
  
 
 0.714
EDM64977.1
Methylmalonyl-CoA mutase-like protein; COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
    
  0.655
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.538
EDM66433.1
Acetyltransferase, putative; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
 
  0.524
EDM67622.1
Hypothetical FlmD; COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase.
 
 
 0.521
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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