Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM68865.1FHA domain protein; COG0119 Isopropylmalate/homocitrate/citramalate synthases. (449 aa)    
Predicted Functional Partners:
EDM65767.1
Putative two-component sensor; COG0642 Signal transduction histidine kinase.
  
 
 0.918
EDM66701.1
Sensor protein BarA; COG0642 Signal transduction histidine kinase.
  
 
 0.861
EDM66473.1
COG0642 Signal transduction histidine kinase.
  
 
 0.859
EDM67653.1
COG0515 Serine/threonine protein kinase.
   
 0.833
apaH
Diadenosinetetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.823
EDM66994.1
Hypothetical protein; COG2203 FOG: GAF domain.
  
 
 0.811
EDM68341.1
Hypothetical protein; COG3710 DNA-binding winged-HTH domains.
  
 
  0.796
EDM68866.1
rarD protein; COG2962 Predicted permeases.
       0.773
EDM67503.1
Probable bifunctional serine/threonine kinase and phosphatase; COG0631 Serine/threonine protein phosphatase.
   
 0.765
EDM67789.1
PAS; COG2202 FOG: PAS/PAC domain.
    
  0.764
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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