STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM69030.1Hypothetical protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (292 aa)    
Predicted Functional Partners:
EDM66408.1
Molybdopterin biosynthesis MoeB protein-like protein; COG1977 Molybdopterin converting factor, small subunit.
  
 0.936
EDM67927.1
Putative NADH oxidase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.920
thiI
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
 0.857
EDM66668.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 0.832
EDM66672.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 0.830
EDM66669.1
Hypothetical protein; COG3321 Polyketide synthase modules and related proteins.
 
 
 0.811
EDM67508.1
Oxidoreductase; Similar to anaerobic dimethyl sulfoxide reductasesubunit B; COG0437 Fe-S-cluster-containing hydrogenase components 1.
     
 0.747
EDM67376.1
COG1680 Beta-lactamase class C and other penicillin binding proteins.
 
   
 0.719
EDM65019.1
COG3108 Uncharacterized protein conserved in bacteria.
  
    0.706
EDM66670.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.696
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.