STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM68225.1RNA polymerase sigma factor for flagellar operon; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (238 aa)    
Predicted Functional Partners:
EDM65256.1
COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
 0.996
EDM67284.1
Transcriptional regulator; COG0784 FOG: CheY-like receiver.
 
 
 0.984
EDM68223.1
Hypothetical chemotaxis LafU protein; COG1360 Flagellar motor protein.
 
  
 0.983
EDM68224.1
COG1291 Flagellar motor component.
 
  
 0.968
EDM68242.1
LfgC; COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.966
EDM65251.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.957
flgK
COG1256 Flagellar hook-associated protein.
 
  
 0.954
EDM65252.1
Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.952
EDM68241.1
LfgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.950
EDM68243.1
LfgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.942
Your Current Organism:
Moritella sp. PE36
NCBI taxonomy Id: 58051
Other names: M. sp. PE36
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.