node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM64626.1 | EDM65170.1 | PE36_00010 | PE36_14796 | RpL5; COG0094 Ribosomal protein L5. | COG0051 Ribosomal protein S10. | 0.997 |
EDM64626.1 | efp | PE36_00010 | PE36_23311 | RpL5; COG0094 Ribosomal protein L5. | Protein translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.993 |
EDM64626.1 | rplF | PE36_00010 | PE36_00025 | RpL5; COG0094 Ribosomal protein L5. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
EDM64626.1 | rplM | PE36_00010 | PE36_14671 | RpL5; COG0094 Ribosomal protein L5. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
EDM64626.1 | rplR | PE36_00010 | PE36_00030 | RpL5; COG0094 Ribosomal protein L5. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
EDM64626.1 | rplU | PE36_00010 | PE36_22660 | RpL5; COG0094 Ribosomal protein L5. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
EDM64626.1 | rpsD | PE36_00010 | PE36_14304 | RpL5; COG0094 Ribosomal protein L5. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
EDM64626.1 | rpsG | PE36_00010 | PE36_23927 | RpL5; COG0094 Ribosomal protein L5. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
EDM64626.1 | rpsL | PE36_00010 | PE36_23932 | RpL5; COG0094 Ribosomal protein L5. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.997 |
EDM64626.1 | rpsO | PE36_00010 | PE36_05653 | RpL5; COG0094 Ribosomal protein L5. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.995 |
EDM65170.1 | EDM64626.1 | PE36_14796 | PE36_00010 | COG0051 Ribosomal protein S10. | RpL5; COG0094 Ribosomal protein L5. | 0.997 |
EDM65170.1 | efp | PE36_14796 | PE36_23311 | COG0051 Ribosomal protein S10. | Protein translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.992 |
EDM65170.1 | rplF | PE36_14796 | PE36_00025 | COG0051 Ribosomal protein S10. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.996 |
EDM65170.1 | rplM | PE36_14796 | PE36_14671 | COG0051 Ribosomal protein S10. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.995 |
EDM65170.1 | rplR | PE36_14796 | PE36_00030 | COG0051 Ribosomal protein S10. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.996 |
EDM65170.1 | rplU | PE36_14796 | PE36_22660 | COG0051 Ribosomal protein S10. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
EDM65170.1 | rpsD | PE36_14796 | PE36_14304 | COG0051 Ribosomal protein S10. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
EDM65170.1 | rpsG | PE36_14796 | PE36_23927 | COG0051 Ribosomal protein S10. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
EDM65170.1 | rpsL | PE36_14796 | PE36_23932 | COG0051 Ribosomal protein S10. | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
EDM65170.1 | rpsO | PE36_14796 | PE36_05653 | COG0051 Ribosomal protein S10. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |