STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD00114.1Hypothetical protein. (601 aa)    
Predicted Functional Partners:
SDD00092.1
Alpha/beta hydrolase fold.
 
     0.703
SDD77695.1
BNR repeat-containing family member.
  
     0.541
SDD32360.1
Protein of unknown function.
  
     0.512
SDE52530.1
Beta-xylosidase, GH43 family; Belongs to the glycosyl hydrolase 43 family.
  
     0.504
SDE35538.1
Protein of unknown function.
  
     0.502
SDD80295.1
Tetratricopeptide repeat-containing protein.
  
     0.467
SDD00137.1
Hypothetical protein.
       0.456
SDD74440.1
DUF1680 family protein.
  
     0.452
SDD68344.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.439
SDD19773.1
Hypothetical protein.
  
     0.433
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.