STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD05888.1Alpha-glucosidase. (554 aa)    
Predicted Functional Partners:
SDC98672.1
Amino acid transporter.
   
  0.823
SDD02117.1
Amino acid efflux transporter.
   
  0.823
SDD35431.1
Amino acid transporter.
   
  0.823
SDD46534.1
Basic amino acid/polyamine antiporter, APA family.
   
  0.823
SDD58867.1
Arginine:ornithine antiporter / lysine permease.
   
  0.823
SDD20644.1
Trehalose-phosphatase.
  
 
 0.770
SDD83458.1
Levanbiose-producing levanase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.619
SDE40093.1
Alpha-amylase.
 
  
  0.605
SDD20629.1
Trehalose 6-phosphate synthase.
 
 
 0.560
SDD05907.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.525
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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