STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD17592.1CO dehydrogenase maturation factor. (319 aa)    
Predicted Functional Partners:
SDD17576.1
Hypothetical protein.
 
     0.908
SDD85791.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
     0.598
SDD94120.1
Transcriptional regulator, AlpA family.
  
     0.569
SDD47211.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.514
SDD17618.1
Glutamate transport system permease protein.
       0.490
SDD17653.1
Glutamate transport system permease protein.
       0.478
SDE04730.1
SCP-2 sterol transfer family protein.
  
     0.476
SDD04165.1
Protein of unknown function.
  
     0.474
SDD94141.1
Site-specific recombinase XerD.
  
     0.444
SDE04705.1
SCP-2 sterol transfer family protein.
  
     0.429
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.