Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD02287.1 | SDD44933.1 | SAMN05216270_101422 | SAMN05216270_10461 | Hypothetical protein. | Hypothetical protein. | 0.753 |
SDD02287.1 | SDD58532.1 | SAMN05216270_101422 | SAMN05216270_105198 | Hypothetical protein. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.445 |
SDD02287.1 | SDD98547.1 | SAMN05216270_101422 | SAMN05216270_11097 | Hypothetical protein. | Hypothetical protein. | 0.603 |
SDD44933.1 | SDD02287.1 | SAMN05216270_10461 | SAMN05216270_101422 | Hypothetical protein. | Hypothetical protein. | 0.753 |
SDD44933.1 | SDD58532.1 | SAMN05216270_10461 | SAMN05216270_105198 | Hypothetical protein. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.474 |
SDD44933.1 | SDD98547.1 | SAMN05216270_10461 | SAMN05216270_11097 | Hypothetical protein. | Hypothetical protein. | 0.456 |
SDD58462.1 | SDD58513.1 | SAMN05216270_105195 | SAMN05216270_105197 | Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Protein of unknown function. | 0.617 |
SDD58462.1 | SDD58532.1 | SAMN05216270_105195 | SAMN05216270_105198 | Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.449 |
SDD58462.1 | tsaD | SAMN05216270_105195 | SAMN05216270_105196 | Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.884 |
SDD58513.1 | SDD58462.1 | SAMN05216270_105197 | SAMN05216270_105195 | Protein of unknown function. | Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.617 |
SDD58513.1 | SDD58532.1 | SAMN05216270_105197 | SAMN05216270_105198 | Protein of unknown function. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.554 |
SDD58513.1 | tsaD | SAMN05216270_105197 | SAMN05216270_105196 | Protein of unknown function. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.614 |
SDD58532.1 | SDD02287.1 | SAMN05216270_105198 | SAMN05216270_101422 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Hypothetical protein. | 0.445 |
SDD58532.1 | SDD44933.1 | SAMN05216270_105198 | SAMN05216270_10461 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Hypothetical protein. | 0.474 |
SDD58532.1 | SDD58462.1 | SAMN05216270_105198 | SAMN05216270_105195 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.449 |
SDD58532.1 | SDD58513.1 | SAMN05216270_105198 | SAMN05216270_105197 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Protein of unknown function. | 0.554 |
SDD58532.1 | SDD58553.1 | SAMN05216270_105198 | SAMN05216270_105199 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Dihydrofolate reductase. | 0.523 |
SDD58532.1 | SDD98547.1 | SAMN05216270_105198 | SAMN05216270_11097 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Hypothetical protein. | 0.454 |
SDD58532.1 | tsaD | SAMN05216270_105198 | SAMN05216270_105196 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.449 |
SDD58553.1 | SDD58532.1 | SAMN05216270_105199 | SAMN05216270_105198 | Dihydrofolate reductase. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.523 |
page 1 of 2