STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD59624.1Putative aldouronate transport system substrate-binding protein. (566 aa)    
Predicted Functional Partners:
SDD59664.1
Putative aldouronate transport system permease protein.
 
   0.944
SDD59640.1
Putative aldouronate transport system permease protein.
 
 
  0.927
SDD64320.1
Putative aldouronate transport system permease protein.
  
   0.754
SDD77915.1
Putative aldouronate transport system permease protein.
  
   0.751
SDC97895.1
Putative aldouronate transport system permease protein.
  
   0.747
SDD70503.1
Multiple sugar transport system permease protein/putative aldouronate transport system permease protein.
  
   0.702
SDC97917.1
Putative aldouronate transport system permease protein.
  
 
  0.656
SDD77891.1
Putative aldouronate transport system permease protein.
  
 
  0.656
SDD64344.1
Putative aldouronate transport system permease protein.
  
 
  0.654
SDD70479.1
Putative aldouronate transport system permease protein.
  
 
  0.619
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.