STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD79231.1Coenzyme F420-reducing hydrogenase, gamma subunit. (261 aa)    
Predicted Functional Partners:
SDD79217.1
Coenzyme F420-reducing hydrogenase, alpha subunit.
 
 0.999
SDD79260.1
NAD(P)H-flavin reductase.
 
  
 0.992
SDC97147.1
Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
  0.984
SDD79290.1
4Fe-4S dicluster containing protein.
 
  
 0.974
SDD79439.1
Hydrogenase maturation protease.
 
 
 0.958
SDE44588.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
  0.947
SDD97306.1
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 0.936
SDD97282.1
NADH-quinone oxidoreductase subunit E.
   
 0.919
SDD79350.1
Hydrogenase expression/formation protein HypD.
 
   
 0.876
SDD79406.1
Hydrogenase maturation protein HypF.
 
  
 0.875
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.