Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD99628.1 | SDE05374.1 | SAMN05216270_110145 | SAMN05216270_111173 | Diguanylate cyclase (GGDEF) domain-containing protein. | Transcriptional regulator, TetR family. | 0.440 |
SDD99628.1 | SDE08588.1 | SAMN05216270_110145 | SAMN05216270_11288 | Diguanylate cyclase (GGDEF) domain-containing protein. | Transcriptional regulator, TetR family. | 0.440 |
SDE05374.1 | SDD99628.1 | SAMN05216270_111173 | SAMN05216270_110145 | Transcriptional regulator, TetR family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.440 |
SDE05374.1 | SDE08588.1 | SAMN05216270_111173 | SAMN05216270_11288 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.674 |
SDE08563.1 | SDE08588.1 | SAMN05216270_11287 | SAMN05216270_11288 | Acetyltransferase (GNAT) family protein. | Transcriptional regulator, TetR family. | 0.682 |
SDE08563.1 | SDE08610.1 | SAMN05216270_11287 | SAMN05216270_11289 | Acetyltransferase (GNAT) family protein. | 2,4-dienoyl-CoA reductase. | 0.485 |
SDE08588.1 | SDD99628.1 | SAMN05216270_11288 | SAMN05216270_110145 | Transcriptional regulator, TetR family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.440 |
SDE08588.1 | SDE05374.1 | SAMN05216270_11288 | SAMN05216270_111173 | Transcriptional regulator, TetR family. | Transcriptional regulator, TetR family. | 0.674 |
SDE08588.1 | SDE08563.1 | SAMN05216270_11288 | SAMN05216270_11287 | Transcriptional regulator, TetR family. | Acetyltransferase (GNAT) family protein. | 0.682 |
SDE08588.1 | SDE08610.1 | SAMN05216270_11288 | SAMN05216270_11289 | Transcriptional regulator, TetR family. | 2,4-dienoyl-CoA reductase. | 0.548 |
SDE08610.1 | SDE08563.1 | SAMN05216270_11289 | SAMN05216270_11287 | 2,4-dienoyl-CoA reductase. | Acetyltransferase (GNAT) family protein. | 0.485 |
SDE08610.1 | SDE08588.1 | SAMN05216270_11289 | SAMN05216270_11288 | 2,4-dienoyl-CoA reductase. | Transcriptional regulator, TetR family. | 0.548 |