STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE17390.1Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (1220 aa)    
Predicted Functional Partners:
SDE17408.1
Glycosyl hydrolases family 43.
 
     0.812
SDD01245.1
alpha-N-arabinofuranosidase.
 
   
 0.704
SDD45273.1
Lysophospholipase L1.
 
     0.693
SDE16541.1
Lysophospholipase L1.
 
     0.674
SDD74424.1
F5/8 type C domain-containing protein; Belongs to the glycosyl hydrolase 43 family.
 
     0.665
SDE17425.1
Multiple sugar transport system substrate-binding protein/putative aldouronate transport system substrate-binding protein.
 
     0.640
SDE52546.1
Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.599
SDE09201.1
Endo-1,4-beta-xylanase.
 
   
 0.596
SDE17502.1
Protein of unknown function, DUF624.
 
     0.581
SDC97267.1
Endo-1,4-beta-xylanase.
 
   
 0.578
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.