STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE16741.1ABC-2 type transport system permease protein. (257 aa)    
Predicted Functional Partners:
SDE16716.1
ABC-2 type transport system ATP-binding protein.
 
    0.941
SDE16696.1
Signal transduction histidine kinase.
 
    0.798
SDE33773.1
ABC-2 type transport system ATP-binding protein.
  
    0.710
SDE16679.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
     0.630
SDE16760.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.536
SDE16780.1
Hemerythrin HHE cation binding domain-containing protein.
       0.510
SDE33763.1
ABC-2 type transport system permease protein.
  
  
 
0.463
SDC99858.1
Peptide/nickel transport system substrate-binding protein.
  
  
  0.458
SDE35980.1
Hypothetical protein.
  
     0.445
SDD08884.1
Polar amino acid transport system permease protein.
  
  
  0.435
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.