STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE32702.1Helix-turn-helix domain-containing protein. (240 aa)    
Predicted Functional Partners:
SDE32718.1
Predicted SnoaL-like aldol condensation-catalyzing enzyme.
       0.658
SDE32682.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
       0.634
SDE32766.1
2-haloacid dehalogenase.
 
     0.526
SDD92391.1
DNA-binding transcriptional regulator, MarR family.
  
 
   0.480
SDD92139.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
  
    0.433
SDD03706.1
TIGR03083 family protein.
   
   0.429
SDD23156.1
TIGR03083 family protein.
   
   0.429
SDD49173.1
Hypothetical protein.
   
   0.429
SDD56485.1
TIGR03083 family protein.
   
   0.429
SDE03863.1
TIGR03083 family protein.
   
   0.429
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.