STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43371.1Thioredoxin. (244 aa)    
Predicted Functional Partners:
SDD30292.1
Uncharacterized membrane protein.
 
  
 0.668
SDE39394.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.640
SDE43343.1
Copper transport protein.
       0.575
SDE39357.1
Cytochrome c-type biogenesis protein.
 
   
 0.552
SDE00129.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.497
SDD65849.1
Glucose-6-phosphate dehydrogenase assembly protein OpcA.
  
     0.477
SDD91004.1
Signal transduction histidine kinase.
  
 
 0.452
SDD36405.1
Protein of unknown function.
  
     0.433
SDE09560.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit.
  
 
   0.431
SDD00815.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.