STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE47765.1DoxX-like family protein. (115 aa)    
Predicted Functional Partners:
SDD86107.1
ATPase family associated with various cellular activities (AAA).
  
  
  0.662
SDE47748.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.603
SDD16329.1
Ketosteroid isomerase homolog.
  
     0.563
SDD38728.1
Hypothetical protein.
  
     0.555
SDD33004.1
Hypothetical protein.
  
     0.519
SDC96904.1
Transcriptional regulator, TetR family.
  
     0.494
SDD93229.1
FtsX-like permease family protein.
  
     0.459
SDC96700.1
Saccharopine dehydrogenase NADP binding domain-containing protein.
  
     0.439
SDE53351.1
Alpha/beta hydrolase family protein.
  
     0.409
Your Current Organism:
Glycomyces harbinensis
NCBI taxonomy Id: 58114
Other names: ATCC 43155, DSM 46494, G. harbinensis, IFO 14487, JCM 7347, NBRC 14487, NRRL 15337, strain LL-DO5139
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.