STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000715885_01256Unannotated protein. (131 aa)    
Predicted Functional Partners:
GCA_000715885_05023
Unannotated protein.
  
     0.619
GCA_000715885_01247
Unannotated protein.
  
     0.598
GCA_000715885_03662
Unannotated protein.
  
     0.572
GCA_000715885_05151
Unannotated protein.
  
     0.535
GCA_000715885_00337
Unannotated protein.
  
     0.473
GCA_000715885_00612
Unannotated protein.
  
     0.471
GCA_000715885_05864
Unannotated protein.
  
     0.468
GCA_000715885_01257
Unannotated protein.
       0.462
GCA_000715885_01443
Unannotated protein.
  
     0.455
GCA_000715885_01250
Unannotated protein.
  
    0.423
Your Current Organism:
Glycomyces tenuis
NCBI taxonomy Id: 58116
Other names: ATCC 49849, DSM 44171, G. tenuis, IFO 15904, INA n-5888, JCM 9087, NBRC 15904, NRRL B-16895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.