STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000715885_01504Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_000715885_01505
Unannotated protein.
 
     0.856
GCA_000715885_01844
Unannotated protein.
   
 0.809
GCA_000715885_03090
Unannotated protein.
   
  0.755
GCA_000715885_02141
Unannotated protein.
   
 
 0.736
GCA_000715885_01360
Unannotated protein.
   
  0.672
GCA_000715885_01364
Unannotated protein.
   
 
  0.670
GCA_000715885_01034
Unannotated protein.
   
 
  0.668
GCA_000715885_03173
Unannotated protein.
    
  0.656
GCA_000715885_01129
Unannotated protein.
   
 
  0.653
GCA_000715885_01270
Unannotated protein.
    
  0.642
Your Current Organism:
Glycomyces tenuis
NCBI taxonomy Id: 58116
Other names: ATCC 49849, DSM 44171, G. tenuis, IFO 15904, INA n-5888, JCM 9087, NBRC 15904, NRRL B-16895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.