STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000715885_04983Unannotated protein. (226 aa)    
Predicted Functional Partners:
GCA_000715885_04982
Unannotated protein.
 
   0.944
GCA_000715885_00245
Unannotated protein.
 
   0.912
GCA_000715885_00175
Unannotated protein.
 
   0.847
GCA_000715885_05962
Unannotated protein.
  
 
  0.638
GCA_000715885_03434
Unannotated protein.
  
   0.565
GCA_000715885_02771
Unannotated protein.
   
    0.543
GCA_000715885_04984
Unannotated protein.
       0.418
GCA_000715885_04985
Unannotated protein.
       0.418
GCA_000715885_04986
Unannotated protein.
       0.418
GCA_000715885_04987
Unannotated protein.
       0.418
Your Current Organism:
Glycomyces tenuis
NCBI taxonomy Id: 58116
Other names: ATCC 49849, DSM 44171, G. tenuis, IFO 15904, INA n-5888, JCM 9087, NBRC 15904, NRRL B-16895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.