STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000715885_06082Unannotated protein. (88 aa)    
Predicted Functional Partners:
GCA_000715885_04680
Unannotated protein.
  
 0.985
GCA_000715885_04055
Unannotated protein.
    
 0.898
GCA_000715885_05649
Unannotated protein.
     
 0.873
GCA_000715885_04249
Unannotated protein.
    
  0.806
GCA_000715885_05884
Unannotated protein.
    
  0.806
GCA_000715885_03417
Unannotated protein.
   
 
 0.761
GCA_000715885_01369
Unannotated protein.
   
 
 0.760
GCA_000715885_02540
Unannotated protein.
   
 
  0.748
GCA_000715885_01361
Unannotated protein.
   
  
 0.743
GCA_000715885_04205
Unannotated protein.
  
 0.723
Your Current Organism:
Glycomyces tenuis
NCBI taxonomy Id: 58116
Other names: ATCC 49849, DSM 44171, G. tenuis, IFO 15904, INA n-5888, JCM 9087, NBRC 15904, NRRL B-16895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.